Discovery sets stage for vaccine against gastric cancer, ulcers

H. pylori is one of the most common disease-causing bacteria. More than half of the world’s population have the bacteria in their body; and while in Canada overall prevalence of H. pylori is between 20% and 30%, some groups – including Indigenous communities – have higher rates.

Using the Canadian Light Source at the University of Saskatchewan (USask) researchers from Quebec’s National Institute of Scientific Research (INRS) have for the first time solved the structure of the protein that plays a key role in helping H. pylori stick to the lining of our stomach. Their research paves the way for developing a vaccine against the infection.

It is H. pylori’s ability to bind to the inside of the stomach that helps it survive and cause health problems. The pathogen is responsible for nearly all gastric cancers and peptic ulcers. Around one in 10 people who carry the common pathogen will develop an ulcer; almost 3% will get stomach cancer.

Professor Charles Calmettes, a biochemist at INRS, says that being able to see the structure of the protein HpaA helps scientists better understand H. pylori’s “stickiness” and why our body reacts by causing certain immune cells to cause inflammation. His team’s findings were published in the journal mBio.

Read more on CLS website

Fertilisation under the X-ray beam

After the egg has been fertilized by a sperm, the surrounding egg coat tightens, mechanically preventing the entry of additional sperm and the ensuing death of the embryo. A team from the Karolinska Institutet has now gained this new insight through measurements at the X-ray light sources BESSY II, DLS and ESRF. 

Fertilization in mammals begins when a sperm attaches to the egg coat, a filamentous extracellular envelope that sperm must penetrate in order to fuse with the egg. Now an international team of researchers has mapped in detail the structure and function of the protein ZP2, an egg coat filament component that plays a key role in regulating how egg and sperm interact with each other at fertilization.

“It was known that ZP2 is cleaved after the first sperm has entered the egg, and we explain how this event makes the egg coat harder and impermeable to other sperm,” says Luca Jovine, Professor at the Department of Biosciences and Nutrition, Karolinska Institutet, who led the study. “This prevents polyspermy – the fusion of multiple sperm with a single egg – which is a fatal condition for the embryo.”

The changes in the egg coat after fertilization are also crucial to female fertility by ensuring the protection of the developing embryo until this implants in the uterus. The new knowledge may therefore have implications for the development of non-hormonal contraceptives that interfere with the formation of the egg coat. Moreover, the study explains egg coat-associated forms of female infertility. 

“Mutations in the genes encoding egg coat proteins can cause female infertility, and more and more such mutations are being discovered,” explains Luca Jovine. “We hope that our study will contribute to the diagnosis of female infertility and, possibly, the prevention of unwanted pregnancies.”

Read more on HZB website

The special role of magnetic Ni ions in the electronic structure

Researcher from the Institute of Physics in Zagreb, in collaboration with scientists from AGH University of Krakow, Solaris synchrotron, Jagiellonian University, University of Zagreb, Institute of Nuclear Physics PN, and TU Wien, revealed the electronic structure of nickel intercalated 2H-NbS2. The collaboration between experiment and theory provided insight into the special role of magnetic Ni ions in the electronic structure. The measured spectra and theoretical analysis indicate zero algebraic sum of hybridization integrals of relevant Ni orbitals and the conducting planes of the host material.  

Two-dimensional magnetic materials are of great interest from the fundamental point of view and for applications. In particular, the magnetic sublayers, introduced by intercalation into the van der Waals gaps of the host transition metal dichalcogenides, are known to produce various magnetic states depending on the choice of magnetic intercalates, with some being tunable by pressure and doping. The magnetic intercalates strongly modify the electronic coupling between layers of the host compound. Understanding the origins of such variability, starting from the underlying electronic structure, is a significant challenge. By using angle-resolved photoelectron spectroscopy (ARPES) with various photon energies and ab initio electronic structure calculations, the study revealed the electronic structure of Ni1/3NbS2.

Read more on SOLARIS website

Image: Fig 1. Schematic image of strong spin-selective hybridization between NbS2 layers provided by intercalated magnetic ions (Ni, Co). The symmetries of dominant bridging orbitals in (a) Ni1/3NbS2 and (b) Co1/3NbS2. (c) The calculated band structures that show the type of magnetic ordering strongly affect the electronic structure. (d) The Fermi surface observed by ARPES. The magnetic fluctuations at bridging sites are prone to produce a strong electron correlation effect at the Fermi level (shallow electron pockets indicated by red arrows), which is inaccessible by DFT+U calculations.

Credit: Yuki Utsumi Boucher

“Stripy” algae tell us more about possibilities in material design

As we celebrate the 155th anniversary of the periodic table this March, we mark the milestone during British Science Week 2024 by shedding light on the chemical building blocks of an amazing sea creature.  

The light generated by Diamond Light Source is one of the most powerful in the world, able to detail almost all the elements on the periodic table at a molecular level. And a recent discovery about tiny organisms means big news for biogeochemists.  

The ability to see the elemental composition of microorganisms is only possible with the brilliant X-ray light available at synchrotrons like Diamond. When the elements were classified 155 years ago, with creation of the periodic table, it would have been impossible to imagine today’s groundbreaking technology. Being able to pinpoint the location of almost any element means scientists can discover things like the miniscule stripes of calcium and strontium on a sea-dwelling organism.  

And why is this level of detail important? By working at this atomic scale, learning how even the tiniest creature are formed, scientists can translate this knowledge to bigger things, like better medicines, cures for viruses, and advanced engineering possibilities.  

In a paper from the Environmental Science: Processes and Impacts of the Royal Society of Chemistry, users from Diamond Light Source, University of Sheffield and the Institute of Environmental Science and Technology (ICTA) at Universitat Autònoma de Barcelona studied marine algae on our I14 beamline. This study was part of a year in industry student project.  

With the high-resolution X-ray techniques, the scientists have learnt some interesting details about coccolithophores, which is a type of marine plankton.  

These organisms create their own outer shells called coccoliths, which are made up of calcium carbonate (the same material as chalk) as well as some other minor elements like strontium. The researchers created a high-resolution 3D image of the surprisingly stripy chemical makeup of these structures leading to new findings about how they are formed.  

This single-celled algae can be found in the sunlight zone of the ocean. They use chlorophyll to capture the sunlight and use photosynthesis to turn it into energy. This means they consume carbon dioxide and release oxygen.  

Coccolithophores are ecologically important and hugely contribute to the marine biological pump, the mechanism that takes carbon away from the atmosphere and the land, transporting it to the ocean interior and seafloor sediments.  

Read more on Diamond website  

Image : False colour scanning electron micrographs of different coccolithophore species

New imaging technique for deeper insights in breast cancer metastasis

A collaborative effort between researchers from DESY, the University Medical Center Hamburg-Eppendorf (UKE), Chalmers University in Sweden and the Paul Scherrer Institute in Switzerland has yielded a cutting-edge multimodal imaging approach to investigate breast cancer tissue. With the help of this technique, researchers can simultaneously extract information about the nanostructure of the tumor and quantify the chemical elements present in a millimeter-scale sample in all three dimensions. A unique combination of research possibilities at PETRA III and new analysis methods enables this high level of detail. 

Breast cancer caused 685 000 deaths globally in 2020 according to the WHO. It is not life-threatening in its earliest form. But if the cancer cells are able to spread further in the tissue to nearby lymph nodes or important organs, this metastasis can be fatal. In a recent pilot study published in Nature Scientific Reports, the team applied this revolutionary imaging approach to a breast cancer sample. The results show how key molecules collectively influence the metastatic mechanism. This breakthrough paves the way for an in-depth investigation of breast cancer metastasis, promising novel therapeutic approaches and personalised treatment strategies, which could ultimately improve patients’ lives if recognized early enough.

Traditional experimental models often fall short, relying on 2D cell cultures or animal models that do not faithfully replicate the complex physiological patterns of human tumor environments. The multimodal imaging approach presented in this study represents a significant step forward by providing simultaneous nanoscale morphological and physiological information from real samples, thus giving researchers information about the shape and composition of real cancer tissue.

André Conceição, the first author and beamline scientist at the PETRA III SAXSMAT beamline P62, emphasises, “Although demonstrated for breast cancer, this approach’s versatility extends to other organs and diseases.”

The study opens avenues for further exploration of breast cancer metastasis and pre-metastatic niches (PMNs). Advanced X-ray multimodal tomography can generate complementary 3D maps for different breast cancer molecular subtypes. It holds the potential to contribute to the development of more targeted and effective strategies for diagnosis and treatment.

Read more on DESY website

Image: 3D vector field of the collagen direction and degree of orientation obtained by SAXS-Tensor-Tomography

Argonne rapid cross-facility data processing

As the volume of data generated by large-scale experiments continues to grow, the need for rapid data analysis capabilities is becoming increasingly critical to new discoveries. 

At the U.S. Department of Energy’s (DOE) Argonne National Laboratory, the co-location of the Argonne Leadership Computing Facility (ALCF) and the Advanced Photon Source (APS) provides an ideal proving ground for developing and testing methods to closely integrate supercomputers and experiments for near-real-time data analysis.

For over a decade, the ALCF and APS, both DOE Office of Science user facilities, have been collaborating to build the infrastructure for integrated ALCF-APS research, including work to develop workflow management tools and enable secure access to on-demand computing. In 2023, the team deployed a fully automated pipeline that uses ALCF resources to rapidly process data obtained from the X-ray experiments at the APS. 

To demonstrate the capabilities of the pipeline, Argonne researchers carried out a study focused on a technique called Laue microdiffraction, which is employed at the APS and other light sources to analyze materials with crystalline structures. The team used the ALCF’s Polaris supercomputer to reconstruct data obtained from an APS experiment, returning reconstructed scans to the APS within 15 minutes of them being sent to the ALCF.

The researchers detailed their efforts in their article “Demonstrating Cross-Facility Data Processing at Scale With Laue Microdiffraction,” which was recognized with the Best Paper Award at the 5th Annual Workshop on Extreme-Scale Experiment-in-the-Loop Computing (XLOOP 2023) at the Supercomputing 2023 (SC23) conference in November. Led by APS software engineer Michael Prince, the team includes Doğa Gürsoy, Dina Sheyfer, Ryan Chard, Benoit Côtê, Hannah Paraga, Barbara Frosik, Jon Tischler and Nicholas Schwarz.

Read more on Argonne website

Image: Argonne researchers Hannah Parraga (far right), Michael Prince (second from right) and Nicholas Schwarz (third from right) lead a demo at the SC23 conference on using integrated computing resources to accelerate discoveries at the Advanced Photon Source.

Credit: Argonne National Laboratory

Paganini’s “Il Cannone” sophisticated X-ray analysis at the ESRF

The European Synchrotron, the ESRF, played host to the most famous violin in the world: ‘Il Cannone’ violin, crafted in 1743 and played by the great virtuoso Niccolò Paganini. The Municipality of Genoa and the Premio Paganini teamed up with ESRF scientists to use the world’s brightest synchrotron to carry out X-ray analysis of the iconic violin.

The conservation of ancient violins of historical and cultural high interest, such as “Il Cannone”, Niccolò Paganini’s favourite violin, which ranks among the most important musical instruments in the history of Western music, requires constant monitoring of their state of health. The Municipality of Genoa in Italy and the Premio Paganini have developed a programme with the ESRF for an in-depth monitoring and analysis of the behaviour of the violin in different situations, in order to better preserve and understand this precious historical artefact. In this context, the Municipality of Genoa and its conservators have teamed up with ESRF scientists to define a measurement protocol and perform a unique experimental X-ray study – using non-destructive X-ray techniques – of the structural status of the wood and the bonding parts of the violin. Working day and night, they used a technique called multi-resolution propagation phase-contrast X-ray microtomography at the ESRF’s new BM18 beamline to scan the violin.

‘ll Cannone’ was built in 1743 by the great Cremonese luthier Bartolomeo Giuseppe Guarneri, also known as ‘del Gesù’. Paganini enjoyed an almost symbiotic relationship with what he called “my cannon violin” for its acoustic prowess. The ‘Cannone’ became an exceptional partner for the virtuosities of the musician, who developed new violin techniques by exploiting the instrument’s potential to the full. Niccolò Paganini left the ‘Cannone’ to his hometown, Genoa, “so that it may be perpetually preserved.” The violin has been kept in Palazzo Tursi, the seat of the Municipality of Genoa since 1851. The ‘Cannone’ is rarely played. Some famous violinists have performed with the ‘Cannone’ in concerts in Italy and abroad; however, playing the precious instrument remains a privilege reserved for the winner of Genoa’s biennial Premio Paganini International Violin Competition.

The technique applied at the ESRF has been widely used for palaeontology over the last two decades. This technique has reached a new level of sensitivity and resolution thanks to the ESRF’s new Extremely Brilliant Source, which, since its commissioning in August 2020, provides experimental performances at least 100 times better than before. Combined with the unique capabilities of the new BM18 beamline, it offers the unprecedented capability to reconstruct a 3D X-ray image of the complete violin at the wood cellular structure level, with the possibility to zoom in locally anywhere in the violin, down to the micrometric scale. As a result, the experiments carried out at the ESRF provide a full 3D vision of the conservation status of the violin, but also a super-precise representation of the details of the bold structure of “Il Cannone”, which possesses a uniquely powerful voice, and also full mapping of the previous interventions and reparations done in the past by lute makers.

Read more on ESRF website

Image: Close-up view of Paganini’s “Il Cannone” on the experimental station BM18 at the ESRF. 

Credit: ESRF/P. Jayet

Exploring Matter at or under Extreme Conditions at Diamond

We’re all familiar with ice – water frozen into its solid state, at or below 0°C at standard atmospheric pressure (1 atm, or 101.325 kPa). But this naturally occurring crystalline solid (officially known as ice Ih or ice one h) is just one of at least nineteen phases of ice, each with a different packing geometry. The less familiar phases (polymorphs) occur at different pressures and temperatures. The ice polymorphs have differing densities, crystalline structures, and proton ordering. These strange phases of ice are just one example of what happens to matter at extremely high pressures.

The physical and chemical properties of a material depend on its structure and the distances between its atoms. Pressure has far more of an effect on interatomic distances than temperature, so varying the pressure is a powerful tool for exploring the relationship between structure and properties. Fundamental insights can be used, for example, to inform the design of new materials or to help explain phenomena such as volcanic eruptions that originate from processes deep in the Earth. 

Further, the electronic structure of a material can be very different under pressure, giving rise to extraordinary effects. An insulator such as ice can become a metal or conductor (e.g. Ice XVII, or Superionic water), and metals can become insulators. E.g. Sodium, a pale grey, shiny metal transforms into a glass-like transparent insulator under pressure. Changing electron configurations at high pressure gives elements a different reactivity and chemistry, almost reinventing the periodic table.

Annette Kleppe, Principal Beamline Scientist on Diamond’s I15 beamline, said;

High-pressure devices are superbly suitable for tuning structural and electronic properties of materials. In fact, pressure can change the electronic properties so dramatically that it adds a whole new dimension to the periodic table. High-pressure, when combined with different experimental analysis techniques, is a powerful tool for understanding natural phenomena or designing novel materials, for example. High-pressure research topics range from low-temperature physics to high-temperature Earth and planetary science.

It’s no wonder researchers want to explore these extreme conditions, and Diamond has several facilities to accommodate them. I15 is our dedicated Extreme Conditions beamline, dedicated to X-ray powder diffraction experiments at extreme pressures and temperatures. Users can also carry out high-pressure experiments on beamline I18 (Microfocus Spectroscopy), I19 (Small Molecule Single Crystal Diffraction), and I22 (Small Angle Scattering and Diffraction). 

Dr Dominique Laniel from the University of Edinburgh said; 

Single crystal X-ray diffraction studies of organic molecular solids – the basic building blocks of life – have mostly been confined to pressures below 10 GPa. It is hypothesised that beyond that pressure (equivalent to 100,000 bar), the void space in these solids approaches zero, a turning point in the behaviour of molecular structures. Zero void space meaning that further compression is expected to change the intramolecular and intermolecular bonding interactions . A multidisciplinary team from the Centre for Science at Extreme Conditions at the University of Edinburgh set out to test this theory and push the boundary for high-pressure investigations on this type of molecular solid using the simple amino acid glycine.

Lewis Clough is a joint PhD student between Diamond and the University of Edinburgh. He worked with colleagues from Edinburgh, studying the behaviour of the alpha polymorph of glycine, which persists to at least 50 GPa. Using high-pressure single-crystal diffraction on I15, the team achieved the highest single-crystal pressure data set collected at Diamond on an organic material.

For the experiment, a tiny 50 μm-sized single crystal of α-glycine was loaded into a diamond anvil cell (DAC), a pocket-sized high-pressure apparatus, in which the crystal was compressed between the tips of two diamonds. Using an X-ray energy of 78 keV – significantly higher than standard for single crystal diffraction experiments – the team collected very high-quality data and solved the structure to the highest pressures of 51-52 GPa.

Read more on Diamond website

Image: Photograph of a single crystal of α-glycine compressed to 52.76 GPa in a diamond anvil cell. A section of the crystal structure determined at this pressure is overlaid on the crystal, showing the layers that increase in proximity upon compression, revealing a network of inter-layer hydrogen bonding interactions.

The future of BESSY

In autumn 2023, HZB celebrated 25 years of research at the BESSY II light source in Berlin-Adlershof. To continue offering scientists from all over the world the best research opportunities in the coming decades, it is important to have a vision for BESSY II. In addition, many light sources around the world are currently being modernised or even newly built to keep up with the latest research questions and contribute with state-of-the art research infrastructures.

The article “Material Discovery at BESSY” shows the relevance of BESSY light source for the research questions of the future. The HZB team describes the goals of the BESSY II+ upgrade programme. Among other things, the programme aims to expand operando techniques that are of great benefit in developing materials for the energy transition.

Read more on HZB website

Image: This is what the successor source BESSY III could look like in the future.

Credit: HZB

ANSTO’s Australian Synchrotron Goes Solar for a Greener Future

More than 3,200 solar panels have been installed across the rooftops of the Australian Nuclear Science and Technology Organisation’s (ANSTO) Australian Synchrotron in Clayton, offsetting enough power to light up the whole MCG for more than five years.

The panels, covering an area of nearly 6,600m², including the large and iconic circular roof of the main building that hosts the powerful particle accelerator, will save ANSTO over two million kWh per year while also reducing its carbon footprint by over 1,680 tonnes of CO2 per year.

Director for ANSTO’s Australian Synchrotron, Professor Michael James said the benefit of driving down operating costs is paralleled by ANSTO’s ongoing commitment to a greener future.

“This investment in renewable technology is just one way we can meet our own sustainability goals while also contributing to a cleaner and greener environment,” Prof. James said.

“Electricity is one of our largest operating costs, so our new solar plant will deliver substantial savings and also act as a buffer against increasing energy overheads in the future.

“The reduction in our carbon footprint is enough to offset the running of 367 family-sized cars each year.”

The installation of a 1,668 kWh system and inverter will supply part of the Australian Synchrotron’s total energy requirements and is expected to deliver savings of around $2 million over a five-year period to 2029.

“The saved running costs will be used to support operations as well as the expansion of our research capabilities and facilities,” Prof. James said.

“Going solar was a no-brainer. The size of our rooftops, paired with the ample, uninterrupted exposure to sunlight at our location within the Monash precinct, was a major incentive for us to become more energy efficient.

“While our science facility operates 24 hours per day, during daylight hours, the new solar plant provides a cyclical way to harness the power of light – from the sun to help power our facilities, that in turn, allows us to generate brilliant beams of synchrotron light that are more than a million times brighter than the light from the sun. 

“Some of those brilliant beams of synchrotron light are even used to undertake research into the next generation of solar cell technology.”

The solar panel installation, completed over a five-month period, covers the rooftops of the main Australian Synchrotron building, the Australian Synchrotron Guesthouse, and the Environmentally Controlled Storage Facility.

Read more on ANSTO website

Customized programming strategies for hearing implants

A Western University team has harnessed the bright light of the Canadian Light Source at the University of Saskatchewan (USask) to obtain highly detailed images of the structures in the inner ear responsible for transmitting sound signals to the brain. With these images, they’ve helped pioneer customized programming strategies for hearing implants.

Because of the cochlea’s tiny, delicate, spiral-shaped structure, and the fact that it is encased in the densest bone in the human body, it is hard to use conventional techniques to study its anatomy and how implants interact with it. Synchrotron imaging changed the game by allowing scientists to visualize the cochlea in incredible detail – roughly at the scale of individual cells.

“We were able to obtain high-resolution data on the synchrotron, and then created beautiful three-dimensional images with our collaborators in Sweden,” says Western University’s Dr. Sumit Agrawal.

The team recently published the CLS-enabled mappings of 38 cochleae in the journal Laryngoscope. Agrawal says that this “gold standard data” – based on ultra-detailed imaging of the ear’s anatomy — answers many questions in the field.

The maps the team created should make a huge difference to the sound quality of cochlear implants. As sound travels down the cochlea, different pitches land at different points in the structure for us to hear them. To tune the sound, an implant needs to match these points for that particular patient’s anatomy. But without a map of the inner ear, cochlear implants can only be “one size fits all.”

“It would be like listening to an out-of-tune piano. What we’re doing now is actually mapping each of the electrodes to tune the piano for each individual patient.”

By combining high-resolution imaging from the Bio-Medical Imaging and Therapy (BMIT) facility at the CLS with the team’s deep learning algorithms, researchers can now create customized maps that match the unique anatomy of each patient’s cochlea. The deep-learning algorithm, too, was partly trained on 3D images produced at the CLS.

Read more on CLS website

Power of Movement in Plants

Published in Nature, researchers from Aarhus University and the Technical University of Munich used Diamond’s eBIC facility to uncover new insights into what drives movement in plants.

Auxins are hormones playing a central role and controlling nearly all aspects of plant growth and development. Charles Darwin observed that plants could grow directionally in response to environmental stimuli such as light or gravity. In his book, The Power of Movement in Plants, published in 1880, Darwin showed that the part of the plant responding to such a stimulus differs from the part that perceives it. He proposed that some kind of ‘influence’ must travel from the perception site to the response area. However, Darwin was unable to identify the influence. 

Darwin’s ‘growth accelerating substance’ was identified in 1926 as the hormone auxin. Later research identified that auxin is the growth factor that determines almost all plant responses to environmental changes. Directional transport of the auxin molecule between cells is required to ensure that the auxin response occurs in the correct part of the plant.

It wasn’t until the 1990s that scientists identified the proteins involved in the process. PIN-FORMED (PIN) proteins are auxin transporters, and they are essential for the development of auxin gradients within plant tissues that guide plant growth. They’re named from the distinct needle-like ‘pin’ form, without shoots or flowers, into which plants with dysfunctional PIN proteins grow. Even then, how PIN proteins fold, how they recognise substrates and inhibitors and the molecular mechanism behind transport have remained unknown.

Now researchers from Aarhus University and the Technical University of Munich have used single particle cryo-EM at eBIC to provide the first structural basis of auxin transport by PIN proteins.

Read more on Diamond website

Image: PIN8 is a 40 kDa membrane protein that transports the plant hormone Auxin. It forms a homodimer with each monomer containing two domains: transporter (green) and scaffold (blue). In the transporter domain a distinct crossover (red) is localized at the middle of the membrane plane that defines the auxin binding site. Below the structure are show 8 representative 2D classes from the data collected at eBIC that resulted in 3 distinct conformations solved. To the left are shown a schematic of the transport of Auxin (IAA) with two key conformations coloured that summarizes the transport mechanism as described by the data obtained at eBIC.

Super Strong Magnetic Fields Leave Imprint on Nuclear Matter

Data from heavy ion collisions give new insight into electromagnetic properties of quark-gluon plasma

UPTON, NY—A new analysis by the STAR collaboration at the Relativistic Heavy Ion Collider (RHIC), a particle collider at the U.S. Department of Energy’s (DOE) Brookhaven National Laboratory, provides the first direct evidence of the imprint left by what may be the universe’s most powerful magnetic fields on “deconfined” nuclear matter. The evidence comes from measuring the way differently charged particles separate when emerging from collisions of atomic nuclei at this DOE Office of Science user facility.

As described in the journal Physical Review X, the data indicate that powerful magnetic fields generated in off-center collisions induce an electric current in the quarks and gluons set free, or deconfined, from protons and neutrons by the particle smashups. The findings give scientists a new way to study the electrical conductivity of this “quark-gluon plasma” (QGP) to learn more about these fundamental building blocks of atomic nuclei.

“This is the first measurement of how the magnetic field interacts with the quark-gluon plasma (QGP),” said Diyu Shen, a STAR physicist from Fudan University in China and a leader of the new analysis. In fact, measuring the impact of that interaction provides direct evidence that these powerful magnetic fields exist.

More powerful than a neutron star

Scientists have long believed that off-center collisions of heavy atomic nuclei such as gold, also known as heavy ions, would generate powerful magnetic fields. That’s because some of the non-colliding positively charged protons—and neutral neutrons—that make up the nuclei would be set aswirl as the ions sideswipe one another at close to the speed of light.

“Those fast-moving positive charges should generate a very strong magnetic field, predicted to be 1018 gauss,” said Gang Wang, a STAR physicist from the University of California, Los Angeles. For comparison, he noted that neutron stars, the densest objects in the universe, have fields of about 1014 gauss, while refrigerator magnets produce a field of about 100 gauss and our home planet’s protective magnetic field measures a mere 0.5 gauss. “This is probably the strongest magnetic field in our universe.”

But because things happen very quickly in heavy ion collisions, the field doesn’t last long. It dissipates in less than 10-23 seconds—ten millionths of a billionth of a billionth of a second—making it difficult to observe.

So instead of trying to measure the field directly, the STAR scientists looked for evidence of its impact on the particles streaming out of the collisions.

“Specifically, we were looking at the collective motion of charged particles,” Wang said.

Read more on BNL website

Image: Collisions of heavy ions generate an immensely strong electromagnetic field. Scientists investigate traces of this powerful electromagnetic field in the quark-gluon plasma (QGP), a state where quarks and gluons are liberated from the colliding protons and neutrons.

Credit: Tiffany Bowman and Jen Abramowitz/Brookhaven National Laboratory

From Theory to Confidence: Building Trust in Twistronics Models

A UK collaboration explored the transformative impact of twist angles on the electronic structure of 2D materials

A single sheet of graphene, composed of a single layer of carbon atoms in a hexagonal pattern, is a semimetal. However, adding a second sheet of graphene, twisted at a slight angle to the first, can give rise to very different electronic properties, depending on the angle. At the ‘magic’ angle of about 1.1°, for example, a twisted bilayer sheet of graphene is a superconductor. The same effect is seen in other 2D materials, giving rise to a new field of study – twistronics – seeking to both understand and exploit the relationship between twist angles and novel electronic properties. In work recently published in Nano Letters, researchers from the University of Warwick and the National Graphene Institute at the University of Manchester used spatially-resolved angle-resolved photoemission spectroscopy (ARPES) on Diamond’s I05 beamline to study the twist-dependent band structure of twisted-bilayer, monolayer-on-bilayer, and double-bilayer graphene. Their results show good agreement between experimental measurements and theoretical simulations, confirming that the models can be used to explore the electronic band structure and emergent transport and optical properties of twisted-few-layer graphenes. 

Prof Neil Wilson at the University of Warwick opens by noting that;

Twistronics is a new concept in 2D materials, in condensed matter physics. When you have two atomically thin layers next to each other, their properties depend on the twist angle between them. This happens because of changes to the electronic structure, and there has been a huge amount of research on twistronics – putting two layers together at different twist angles and seeing what happens to the optical properties and electrical properties. You’re working with two very small pieces of 2D material stacked on top of each other, typically only a few micrometres across, which is fine for optical measurements and electrical transport measurements. However, that makes it extremely challenging to study the electronic structure directly.

To get a good look at the electronic structure of these exciting materials, Prof Wilson’s group at the University of Warwick worked with researchers from the National Graphene Institute and Diamond’s I05 beamline. Prof Roman Gorbachev’s group at the National Graphene Institute is a world leader in fabricating these complex samples.

Senior Beamline Scientist Matthew Watson explains;

Angle-resolved ARPES allows us to measure directly the electronic structure of the 2D materials. It allows us to determine both the energy and momentum of the electrons within the material, which gives us directly the electronic structure which underpins the optical properties and the transport properties. And the I05 nano-branch endstation delivers spatially-resolved ARPES from ultra-small spots, on the micrometre length scales we have in these 2D samples.

Read more on Diamond website

Image: Electronic structures of twisted double bilayer graphene at large (left) and “magic” (centre) twist angles, showing the emergence of a flat band at the top, which is at the heart of the various phenomena that emerge in this system. Data measured at I05 at Diamond and reported in Nunn et al.

Credit: Matthew Watson

Real-Time Monitoring after Pancreatic Surgery

Complications after pancreatic surgery are common and can be life-threatening.  One of the most serious yet common complications is postoperative pancreatic fistula. This condition is diagnosed based on increased concentrations of the pancreatic enzyme alpha-amylase in drainage secretions. Currently, the analysis of these enzymes is routinely conducted on the first and third postoperative day. Scientists at the Helmholtz-Zentrum Dresden-Rossendorf (HZDR) and the University Hospital Dresden (UKD) now report in the journal Biosensors and Bioelectronics (DOI: 10.1016/j.bios.2024.116034) on the development of a portable device that can carry out the enzyme determination continuously and in real time.

Up to thirty percent of patients undergoing partial resection of the pancreas suffer from postoperative pancreatic fistula, a complication resulting from leakage of pancreatic enzymes into the abdominal cavity. This condition can considerably prolong hospitalization and lead to a delay or non-administration of postoperative chemotherapy, which is an important component of pancreatic cancer treatment. Postoperative pancreatic fistula is diagnosed by examining the digestive enzyme alpha-amylase in drainage secretions by measuring its biochemical reaction with starch, a storage carbohydrate. The enzyme alpha amylase breaks down starch carbohydrate into its components. High alpha-amylase levels in the drain indicate postoperative pancreatic fistula. In current clinical practice, this test is carried out on the first and third day after surgery. It can take up to six hours until test results become available to caregivers. In addition, the current standard process only provides information on the patient’s condition at a specific point in time.

Development of a millifluidic device

As continuous monitoring of alpha-amylase is not yet feasible, the adjustment of medical treatment in the event of complications can be delayed. For this reason, Dr. Larysa Baraban at the HZDR’s Institute of Radiopharmaceutical Cancer Research, together with her team and colleagues from the Department of Visceral, Thoracic and Vascular Surgery at the University Hospital Dresden, have developed a portable, droplet-based millifluidic device that can measure the drainage fluid’s alpha-amylase activity in real time. This instrument is intended to monitor patients in the critical first days after surgery. Millifluidics means that fluids are passed through tubes of approximately one millimeter in diameter. A miniscule amount of drainage fluid is continuously collected from patient drainage samples and encapsulated into nanoliter-sized droplets with a starch reagent. The use of this microfluidic droplet format reduces the time between sampling and reading to one to two minutes.

To determine the strength of the reaction, Baraban and her team work with a fluorescent dye. The fluorescence increases with increasing concentrations of alpha-amylase. The more intense the dye, the higher the concentration of the alpha-amylase in the drainage secretion, which indicates the presence of postoperative pancreatic fistula. In clinical practice, such a finding could trigger follow-up examinations at an early stage, aiming to avoid deterioration of the complication in patients.

Read ore on HZDR website

Image: Dr. Larysa Baraban – Head of the Life Science Nanomicrosystems department

Credit: HZDR / Anja Schneider

Conversion of carbon dioxide into raw materials more effective with gold

Carbon dioxide, emitted mainly by combustion of fossil fuels, is harmful to the climate and the main reason for increased global warming. Diverting carbon dioxide into hydrogen carriers or chemicals such as methanol, a valuable raw material and energy carrier, is thus highly desired. Supported metal nanoparticle heterogeneous catalysts such as copper on zinc oxide is used for the catalytic conversion of carbon dioxide to methanol. Researchers have now discovered that it is possible to avoid by-products and at the same time make the process more sustainable by adding a small amount of gold to the catalyst.

Carbon dioxide can be converted into methanol and water by reaction with hydrogen. The reaction is only possible in the presence of a catalytic material such as Au or Cu nanoparticles supported on zinc oxide. The chemical reaction will then take place on the particle surfaces. In a recent study, a research team from Germany, Japan and Sweden have shown that modifying the typical ZnO-supported Cu nanoparticles by a small amount of gold (< 10 weight percent) makes the reaction more selective.

Read more on MAX IV website