Open and shut: pain signals in nerve cells

Our daily function depends on signals traveling between nerve cells (neurons) along fine-tuned pathways. Central nervous system neurons contain acid-sensing ion channel 1a (ASIC1a), a protein important in sensing pain and forming memories of fear. An ion channel lodged in the cell membrane that provides a pathway for sodium ions to enter the cell, ASIC1a opens and closes in response to changes in extracellular proton concentrations. When protons accumulate outside the neuron, the channel opens, allowing sodium ions to flow into the cell, depolarizing the cell membrane and generating an electrical signal. The channel eventually becomes desensitized to protons and the gate closes. Scientists have visualized both the open and desensitized channel structures, but the third structure, which forms when the protons dissipate and the channel closes, remained elusive. Using protein crystallography at the ALS, researchers finally visualized the closed channel.

>Read more on the Advanced Light Source website

Animation: As the proton concentration increases or decreases, the gated channel ASIC1a toggles between open and closed positions, controlling the timing of signals traveling through the cell membrane of one neuron en route to the next.

Structures reveal new target for malaria vaccine

The discovery paves the way for the development of a more effective and practical human vaccine for malaria, a disease responsible for half a million deaths worldwide each year.

Malaria kills about 445,000 people a year, mostly young children in sub-Saharan Africa, and sickens more than 200 million. It’s caused by a parasite, Plasmodium falciparum (Pf), and is spread to humans through the bite of an infected Anopheles mosquito.

The parasite’s complex life cycle and rapid mutations have long challenged vaccine developers. Only one experimental vaccine, known as RTS,S, has progressed to a Phase 3 clinical trial (testing on large groups of people for efficacy and safety). To elicit an immune response, this vaccine uses a fragment of circumsporozoite protein (CSP), which covers the malaria parasite in its native conformation. However, the trial results showed that RTS,S is only moderately effective, protecting about one-third of the young children who received it over a period of four years.

>Read more on the Advanced Light Source website.

Image (a) Left: Surface representation of CIS43 (light chain in tan and heavy chain in light blue), with peptide 21 shown as sticks (purple). Right: A 90° rotation of the representation. See entire image here.

MAX IV becomes the first synchrotron to successfully trial neon venting from CERN

The vacuum chambers of MAXIV are only 22 mm of diameter; the chamber size was chosen in order to fit inside the compact magnets of the storage ring. Due to the small diameter of the chamber, the conventional way of pumping using lumped pumps is not efficient nor practical, accordingly, the vacuum system of the 3 GeV storage ring is fully NEG (non-evaporable getter) coated vacuum system.
NEG coating provides the needed pumping and reduces the outgassing due to the photons hitting the chamber walls. For NEG coating to be pumping down it should be activated, activation means that the coating should be heated up to around 200˚C, consequently, any venting to atmosphere will cause the NEG coating to be saturated (can not pump) and should be followed with NEG activation to restore the coating performance. At MAX IV, in order to activate the NEG coating, a major intervention is needed, where the whole achromat (23 m) should be lifted and heated up inside an oven. Such an intervention would last from 2 weeks (if the achromat does not have insertion devices) up to 4 weeks (for achromats with insertion devices).

>Read more on the MAX IV Laboratory website

 

3D X-ray tomography scoops up information about ice cream

There’s nothing quite like an ice cream on a hot day, and eating it before it melts too much is part of the fun.

Ice cream is a soft solid, and its appeal is a complex combination of ‘mouthfeel’, taste and appearance, which are all strongly affected by the underlying microstructure. We know that changes in the microstructure of ice cream occur at storage temperatures above -30°C, so they will occur during shipping, and in freezers at the supermarket and at home. In their ongoing quest to create the perfect ice cream, an international team of researchers brought samples to Diamond to investigate the temperature dependence of these microstructural changes, and the underlying physical mechanisms that control microstructural stability.

>Read more on the Diamond Light Source website

Call for nominations: Innovation Award on Synchrotron Radiation 2018

The Society of Friends of Helmholtz-Zentrum Berlin (HZB) announces the bestowal of the Innovation Award on Synchrotron Radiation*.

The award was established in 2001 for an excellent achievement which has contributed significantly to the further development of techniques, methods or uses of synchrotron radiation. Scientists and engineers from research institutions, universities, and industry within Europe are addressed. The Innovation Award includes a monetary prize of 3000 Euro and will be bestowed at the Users’ Meeting of HZB (BESSY II) in December 2018.

All nominations should be submitted to the Chair of the Society by September 30, 2018. Suggestions of candidates have to be addressed electronically and must include a concise, verifiable description in English of the scientific-technological achievement. The curriculum vitae, the publication list of the candidate(s) and at five most relevant publications have to be submitted. Two references should be named.

Please address nominations to:

Prof. Dr. Mathias Richter
Chair of the Society of Friends of Helmholtz-Zentrum Berlin
Head of Department Radiometry with Synchrotron Radiation, Physikalisch-Technische Bundesanstalt
Faculty of Mathematics and Natural Sciences, Technische Universität Berlin
Email: mathias.richter@ptb.de

*sponsored by SPECS GmbH and BESTEC GmbH, Berlin.

>Read more about the Friends of Helmholtz-Zentrum Berlin e.V. on the HZB website

Picture: Bessy II at Helmholtz-Zentrum Berlin.

Experts disscuss about the future of European particle accelerators

On 19 and 20 July, the ALBA Synchrotron is hosting the 102nd Plenary ECFA meeting, with the participation of 70 researchers, including Dr. Fabiola Gianotti, CERN’s Director-General.

The European Committee for Future Accelerators (ECFA) is an advisory body for CERN Management, CERN Council and its Committees, and to other national and international organizations, on the long-term planning of European High-Energy Physics (HEP) facilities, accelerators and equipment adequate for the conduction of a valid high energy research program.

The participants of the plenary meeting will discuss, during two days, about different topics on high energy physics and the main HEP accelerator facilities in Europe will report on their activities. Fabiola Gianotti, CERN’s Director-General, will report on CERN activities and perspectives. The role of ECFA is of particular relevance in the period 2018-2020 due to the on-going update of the European Strategy for Particle Physics, which will shape the future of the HEP community in Europe and, in particular, what lays ahead for CERN after the High Luminosity LHC project (the upgrade of the Large Hadron Collider (LHC) that aims to increase its luminosity such that the accumulated data will be 10 times larger than with the present configuration).

>Read more on the ALBA website

Fuel cells from plants

Using elements in plants to increase fuel cell efficiency while reducing costs

Researchers from the Institut National de la Recherche Scientifique, Québec are looking into reeds, tall wetlands plants, in order to make cheaper catalysts for high-performance fuel cells.

Due to rising global energy demands and the threat caused by environmental pollution, the search for new, clean sources of energy is on.

Unlike a battery, which stores electricity for later use, a fuel cell generates electricity from stored materials, or fuels.

Hydrogen-based fuel is a very clean fuel source that only produces water as a by-product, and could effectively replace fossil fuels. In order to make hydrogen fuel viable for everyday use, high-performance fuel cells are needed to convert the energy from the hydrogen into electricity.

Hydrogen fuel cells use platinum catalysts to drive energy conversion, but the platinum is expensive, accounting for almost half of a fuel cell’s total cost according to Qiliang Wei, a PhD student in Shuhui Sun’s group from the Institut National de la Recherche Scientifique – Énergie, Matériaux et Télécommunications who studies lower-cost alternatives to platinum catalysts.

>Read more on the Canadian Light Source website

Talented photographers capture the art of science

See the winning photos from Brookhaven Lab’s Photowalk

On Wednesday, May 16, the U.S. Department of Energy’s (DOE) Brookhaven National Laboratory hosted 30 amateur and professional photographers for a behind-the-scenes “Photowalk” of the Lab. The photographers were able to explore and photograph major experimental facilities that are not usually accessible to the public, including the STAR detector at the Relativistic Heavy Ion Collider (RHIC)—the only operating particle collider in the U.S.—and the National Synchrotron Light Source II (NSLS-II)—one of the world’s most advanced synchrotron light sources. Both are DOE Office of Science User Facilities.

Experiments at RHIC and NSLS-II explore the leading edge of fundamental and applied science. At RHIC, physicists collide gold ions, at nearly the speed of light, to recreate the same matter that filled the universe a millionth of a second after the Big Bang. At NSLS-II, scientists use ultra-bright x-ray light to reveal the chemical makeup of proteins, batteries, superconducting materials, and everything in between. The “Photowalkers” lent their talents to capturing the remarkable design of these experiments, showcasing the facilities in all their scientific glory.

>Read more on the National Synchrotron Light Source-II website

Picture: (extract) Finalist picture”X-Ray Eye”. Captured at NSLS-II’s Soft Inelastic Scattering (SIX) beamline.
Credit: Steve Lacker

 

Dr. Gwo-Huei Luo new director of NSRRC

NSRRC BOT Member, Dr. Bon-Chu Chung, and NSRRC User, Prof. Chien-Hong Cheng Elected as Academician

Dr. Gwo-Huei Luo will officially assume the position on August 1, 2018 as the 5th Director of the National Synchrotron Radiation Research Center (NSRRC), Taiwan. The NSRRC Board of Trustees started searching for, and selecting, a new director in January, 2018. Dr. Luo has earned recognition and commendation from the Board for his management experiences and his research and development efforts, particularly, in accelerators.

Dr. Luo received his MS and PhD degrees in Electrical Engineering at University Wisconsin, Madison, USA. Over the years, Dr. Luo has devoted himself to his professional career and become an expert on accelerator physics, microwave engineering, and cryogenic superconducting engineering. Because of his highly-recognized contributions to accelerators, he has served as member of Asian Committee for Future Accelerator (ACFA) and in the international advisory committee of several synchrotron facilities worldwide, such as ILSF, HEPS, SSRF and WHPS. He also served on the Review Committee of the Super-KEKB, an upgrading project of KEKB electron-position collider. In addition, he has been actively promoting and involved in the International Particle Accelerator Conference (IPAC), serving in International Organizing Committee and/or Scientific Program Committee since 2010.

>Read more on the NSRRC website

The impact of summer undergraduate research programs extends beyond the laboratory

Conducting research at a world class facility is no doubt a once-in-a-lifetime experience for any undergraduate student.

By combining that research experience with meaningful peer-learning opportunities and dynamic outreach activities, a memorable summer of science inevitably occurs.
Summer undergraduate research students at CLASSE have been actively influencing the sphere of science education across campus and the community. During their brief time at CLASSE, these students are shaping the research that occurs in laboratory spaces, showcasing their efforts and understanding in conference rooms, and driving the conversations and questions that occur in communal areas. In the laboratory, student devote hours of their time combing through the literature, contributing to the investigation, collecting data, and compiling their results. In their offices, meeting rooms, and communal spaces students reveal their ideas, grow their understanding, and search for connections as they interact with their peers and network of mentors. In addition, outside of the lab and throughout campus and the greater community, students interact directly the public and share their passion for science.

Through informal presentations to mentors and colleagues, summer students reveal their insights and uncertainties surrounding their assigned projects. These talks provide young scientists and engineers with the opportunity to communicate their own understanding of their work to others. This communication helps to solidify their own understanding and stretch their abilities to express this knowledge in a clear, digestible manner.  Researchers must be skilled at transmitting their message so that others recognize the value and implications of their work. In order to be an effective scientist, students must practice being effective communicators and conveyors of knowledge for public consumption.

>Read more on the CHESS website

Image: Students provide others with updates on their research progress via informal chalk talks.

Angular measurement goes nano

At Diamond Light Source we have built and developed a state-of-the art optical metrology laboratory which is equipped with instruments to test and inspect extremely precise mirrors used to focus X-rays for Diamond’s beamlines.

To calibrate this measuring equipment we needed a device that can produce very tiny angle changes in a precise and controlled way.

Imagine a 1m long spirit level set on a flat surface, then place a 1mm spacer under one end. That gives an angular change of 1/1,000 of a radian or 1 milliradian. Radians are an alternative way of describing angles instead of degrees.

Now, instead of a 1m spirit level, we use a 1000km long spirit level, with a 1mm spacer under one end. This would create an angular change of  1 nanoradian, which is exactly what Diamond’s Nano-angle generator (NANGO) can accuractely create.

Image: Diamond-NANGO, with its rotation axis pointing in the horizontal direction.

Young talent from LNLS awarded at international conference

Work on components for Sirius was elected best poster.

Gabriel Vinícius Claudiano, member of the Brazilian Synchrotron Light Laboratory (LNLS), was awarded the prize for best poster in the category “young engineer under 30” during the tenth edition of the MEDSI (Mechanical Engineering Design of Synchrotron Radiation Equipment and Instrumentation) conference, which was held in Paris, France, between June 25th and 29th.

Gabriel’s work is related to the development of components for the beamlines of the new Brazilian synchrotron light source, Sirius. These components are located at the interface between the storage ring and the beamlines, which is called front-end, and their function is to absorb part of the synchrotron light beam to protect sensitive equipment.

>Read more on the LNLS website

Picture: Gabriel Vinícius Claudiano.

Helmholtz International Fellow Award for N. Mårtensson

The Helmholtz Association has presented the Swedish physicist Nils Mårtensson with a Helmholtz International Fellow Award. 

The synchrotron expert of the University of Uppsala, who heads the nobel comitee for physics, cooperates closely with the HZB-Institute Methods and Instrumentation for Synchrotron Radiation Research. Nils Mårtensson is a professor at Uppsala University. He directed the development of the Swedish synchrotron radiation source Max IV and received a grant from the European Research Council (ERC) in 2013. Mårtensson is a member of the Swedish Academy of Sciences and chairman of the Nobel Committee for Physics. At HZB, he cooperates with Alexander Föhlisch’s team at HZB-Institute Methods and Instrumentation for Synchrotron Radiation Research. Together they run the Uppsala Berlin Joint Laboratory (UBjL) to further develop methods and instruments.

Image: Nils Mårtensson, University of Uppsala, cooperates closely with HZB.

How legionella manipulates the host cell by means of molecular mimics

Using synchrotron light, researchers from CIC bioGUNE have solved the structure of RavN, a protein that Legionella pneumophila uses for stealing functions and resources of the host cell.

Mimicry is the ability of some animals to resemble others in their environment to ensure their survival. A classic example is the stick bug whose shape and colour make him unnoticed to possible predators. Many intracellular pathogens also use molecular mimicry to ensure their survival. A part of a protein of the pathogen resembles another protein totally different from the host and many intracellular microorganisms use this capability to interfere in cellular processes that enable their survival and replication.

The Membrane Trafficking laboratory of the CIC bioGUNE in the Basque Country, led by Aitor Hierro, in collaboration with other groups from the National Institutes of Health in the United States, have been working for several years in understanding how the infectious bacterium Legionella pneumhopila interacts with human cells. During this research, experiments have been carried out at the XALOC beamline of the ALBA Synchrotron and I04 beamline of Diamond Light Source (UK). The results enabled scientists to solve the structure of RavN, a protein of L. pneumophila that uses this molecular mimicry to trick the infected cell.

>Read more on the ALBA website

Figure: (extract) Schematic representation of the structure of RavN1-123 as ribbon diagram displayed in two orientations (rotated by 90° along the x axis). Secondary elements are indicated as spirals (helices) or arrows (beta strands), with the RING/U-box motif colored in orange and the C-terminal structure colored in slate. (Full image here)

Linac team has reached major milestones

A big milestone was reached for the MAX IV linear accelerator end of May 2018.

The electron bunches accelerated in the linac was compressed to a time duration below 100 femtoseconds (fs). That means that they were shorter than 1*10^-13s. In fact, we could measure a pulse duration as low as 65 fs FWHM.

The RMS bunch length was then recorded at 32 fs. These results were achieved using only the first of the 2 electron bunch compressors in the MAX IV linac and shows not only that we can deliver short electron bunches, but also that the novel concept adopted in the compressors is working according to theory and simulations.

The ultra-short electron pulses are used to create X-ray pulses with the same short time duration in the linac based light source SPF (Short Pulse Facility). These bursts of X-rays can then be used to make time resolved measurements on materials, meaning you can make a movie of how reactions happen between parts of a molecule.

>Read more on the MAX IV Laboratory website

Picture: Linac team at MAX IV.